Hi there! My name is Jin Su. I am now a third-year PhD student at Westlake University, supervised by Prof. Fajie Yuan. I received my B.S. degree from Huazhong University of Science and Technology in 2022, where I worked with Prof. Wei Wei on the adversarial attack and defense for NLP models.

Currently my research interests lie in the AI for protein, primarily focusing on the protein representation learning. I am also interested in the newest AI technologies and want to apply them to the protein field.

I also like to write interesting and useful code projects, such as easyChat , an easy way to send WeChat messages to your friends automatically. If you have any interesting idea, feel free to email me!

🔥 News

2024.09.06: I will be a reviewer for ICLR 2025 🎉🎉🎉!
2024.06.03: We are thrilled to release ProTrek, a tri-modal PLM modeling protein sequence, structure and function!
2024.05.28: Our preprint SaprotHub is released! Everyone now can effortlessly process data, train protein model and collaborate with an open community🤩!
2024.01.17: Our SaProt paper has been accepted as ICLR 2024 spotlight 🎉🎉🎉!
2023.10.02: We release SaProt , a 650M structure-aware protein language model.

📝 Publications

* denotes equal contribution

ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning

Jin Su, Xibin Zhou, Xuting Zhang, Fajie Yuan

bioRxiv preprint

SaprotHub: Making Protein Modeling Accessible to All Biologists

Jin Su, Zhikai Li, Chenchen Han, Yuyang Zhou, Junjie Shan, Xibin Zhou, Dacheng Ma, The OPMC, Sergey Ovchinnikov, Fajie Yuan

bioRxiv preprint

SaProt: Protein Language Modeling with Structure-aware Vocabulary

Jin Su, Chenchen Han, Yuyang Zhou, Junjie Shan, Xibin Zhou, Fajie Yuan

ICLR 2024 spotlight

Exploring evolution-aware & -free protein language models as protein function predictors

Mingyang Hu, Fajie Yuan, Kevin K. Yang, Fusong Ju, Jin Su, Hui Wang, Fei Yang, Qiuyang Ding

NeurIPS 2022

Multi-granularity textual adversarial attack with behavior cloning

Yangyi Chen*, Jin Su*, Wei Wei

EMNLP 2021

🎖 Honors and Awards

📖 Educations

2022.09 - now, PhD in Westlake University.
2018.09 - 2022.06, B.S. in Huazhong University of Science and Technology.

💬 Invited Talks

2024.08.23, Debora Marks Lab of Harvard Medical School: “SaProt and SaprotHub”.
2024.04.26, AI for Drug Discovery Team, ByteDance Research: “AlphaFold2 evaluation and SaProt”.

💻 Internships